Dish gain is proportional to its surface area. The difference difference between 36" and 33" is about one sixth of a percent. Is it worth it to be concerned about?
Speaking about dual feed, oh yeah, it will be very practical. I'm also contemplating my next C/Ku project (I've got a spare CM 1.2 laying in the basement for about 6-7 months now) and unless Sadune finally releases C/Ku LNB for some reasonable price, multifeed setup the way to go.
Yes, you cannot place both LNBs in the absolute focus point. However, there is not such a thing. It is not a point but rather a "cloud" about the diameter of the wavelength. That means if you are off it center by less than 1/2 of the wavelength you won't notice any difference. You can try that by tuning to a satellite, unscrewing the LNB and try to move it a little watching signal meter.
That is why it actually may make sense to put the C-band off focus because it's much more tolerant to the absolute displacement. Specifically about 4 times as tollerant, e.g. if you put a Ku LNB 1.5" off focus, which more than whole Ku-band wavelength, you're most likely to loose the signal completely, while for C-band it would be less than half so you wouldn't even see the change on the meter!
Note that we are not even taking into account that we can change the dish aim. If we cannot put an LNB in the focus (which is obviously impossible for every LNB in a multifeed) but can adjust the dish aim we can get significantly better results. By adjusting dish aim we can actually put the LNB mouth back in the center of the focus cloud. The only difference now is that the cloud has irregular shape, which is actually pretty complex and assymetrical and grows very fast once you more than 10 degrees off primary dish axis.
In our case if we put two LNB's direcly side by side it would be 5 degrees at most, which wouldn't make the cloud bigger than normal significantly (I'd guess a quarter of an inch at most). Even for Ku there will be almost no difference, the C wouldn't be able to notice a thing even theoretically!
The only pitfall I can see here is ability to control such a multifeed with the receiver since we won't be aiming anymore at the true satellite. I'm pretty sure it can be done with a PC but honestly I don't know if it's possible to specify such an adjustment in the receiver control.